libpappsomspp
Library for mass spectrometry
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pappso::TimsMsRunReaderBase Member List

This is the complete list of members for pappso::TimsMsRunReaderBase, including all inherited members.

accept(const QString &file_name) const overridepappso::TimsMsRunReaderBaseprotectedvirtual
acquireDevice() overridepappso::TimsMsRunReaderBasevirtual
getMsRunId() constpappso::MsRunReader
getRetentionTimeLine() overridepappso::TimsMsRunReaderBasevirtual
getTicChromatogram() overridepappso::TimsMsRunReaderBasevirtual
getTimsDataSPtr()pappso::TimsMsRunReaderBasevirtual
hasScanNumbers() const overridepappso::TimsMsRunReaderBasevirtual
initialize() overridepappso::TimsMsRunReaderBaseprotectedvirtual
isMonoThread() constpappso::MsRunReader
m_isMonoThreadpappso::MsRunReaderprivate
massSpectrumCstSPtr(std::size_t spectrum_index)=0pappso::MsRunReaderpure virtual
massSpectrumSPtr(std::size_t spectrum_index)=0pappso::MsRunReaderpure virtual
mcsp_msRunIdpappso::MsRunReaderprotected
mpa_multiMapScanNumberpappso::MsRunReaderprotected
MsFileAccessorpappso::TimsMsRunReaderBasefriend
msp_timsDatapappso::TimsMsRunReaderBaseprotected
MsRunReader(const MsRunIdCstSPtr &ms_run_id)pappso::MsRunReader
MsRunReader(const MsRunReader &other)pappso::MsRunReader
newXicCoordSPtrFromQualifiedMassSpectrum(const pappso::QualifiedMassSpectrum &mass_spectrum, pappso::PrecisionPtr precision) const overridepappso::TimsMsRunReaderBasevirtual
newXicCoordSPtrFromSpectrumIndex(std::size_t spectrum_index, pappso::PrecisionPtr precision) const overridepappso::TimsMsRunReaderBasevirtual
qualifiedMassSpectrum(std::size_t spectrum_index, bool want_binary_data=true) const =0pappso::MsRunReaderpure virtual
readSpectrumCollection(SpectrumCollectionHandlerInterface &handler)=0pappso::MsRunReaderpure virtual
readSpectrumCollection2(const MsRunReadConfig &config, SpectrumCollectionHandlerInterface &handler)=0pappso::MsRunReaderpure virtual
readSpectrumCollectionByMsLevel(SpectrumCollectionHandlerInterface &handler, unsigned int ms_level)=0pappso::MsRunReaderpure virtual
releaseDevice() overridepappso::TimsMsRunReaderBasevirtual
scanNumber2SpectrumIndex(std::size_t scan_number)pappso::MsRunReadervirtual
setMonoThread(bool is_mono_thread)pappso::MsRunReader
spectrumListSize() const =0pappso::MsRunReaderpure virtual
TimsMsRunReaderBase(MsRunIdCstSPtr &msrun_id_csp)pappso::TimsMsRunReaderBase
TimsMsRunReaderBase(const TimsMsRunReaderBase &msrun_reader_base)pappso::TimsMsRunReaderBase
~MsRunReader()pappso::MsRunReadervirtual
~TimsMsRunReaderBase()pappso::TimsMsRunReaderBasevirtual