libpappsomspp
Library for mass spectrometry
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pappso::TimsDdaPrecursors Member List

This is the complete list of members for pappso::TimsDdaPrecursors, including all inherited members.

fillSpectrumDescriptionWithSqlRecord(SpectrumDescr &spectrum_descr, QSqlQuery &qprecursor_list)pappso::TimsDdaPrecursorsprivate
getClosestPrecursorIdByMz(std::vector< std::vector< double > > ids, double mz_value)pappso::TimsDdaPrecursors
getCombinedMs2ScansByPrecursorId(std::size_t precursor_id)pappso::TimsDdaPrecursors
getMatchPrecursorIdByKo(std::vector< std::vector< double > > ids, double ko_value)pappso::TimsDdaPrecursors
getMs2BuiltinCentroid() constpappso::TimsDdaPrecursors
getPrecursorsByMzRtCharge(int charge, double mz_val, double rt_sec, double k0)pappso::TimsDdaPrecursors
getQualifiedMs1MassSpectrumBySpectrumDescr(const MsRunIdCstSPtr &msrun_id, QualifiedMassSpectrum &mass_spectrum, const SpectrumDescr &spectrum_descr, bool want_binary_data)pappso::TimsDdaPrecursors
getQualifiedMs2MassSpectrumBySpectrumDescr(const MsRunIdCstSPtr &msrun_id, QualifiedMassSpectrum &mass_spectrum, const SpectrumDescr &spectrum_descr, bool want_binary_data)pappso::TimsDdaPrecursors
getSpectrumDescrListByFrameId(std::size_t frame_id) constpappso::TimsDdaPrecursors
getSpectrumDescrWithPrecursorId(std::size_t precursor_id) constpappso::TimsDdaPrecursors
getSpectrumDescrWithScanCoordinates(const std::pair< std::size_t, std::size_t > &scan_coordinates)pappso::TimsDdaPrecursorsprotected
getTotalPrecursorCount() constpappso::TimsDdaPrecursors
getXicCoordTimsFromPrecursorId(std::size_t precursor_id, PrecisionPtr precision_ptr)pappso::TimsDdaPrecursors
m_builtinMs2Centroidpappso::TimsDdaPrecursorsprivate
m_isMonoThreadpappso::TimsDdaPrecursorsprivate
m_mapXicCoordRecordpappso::TimsDdaPrecursorsprivate
m_mutexpappso::TimsDdaPrecursorsprivate
m_totalPrecursorCountpappso::TimsDdaPrecursorsprivate
mcsp_ms1Filterpappso::TimsDdaPrecursorsprivate
mcsp_ms2Filterpappso::TimsDdaPrecursorsprivate
mp_timsDataOriginpappso::TimsDdaPrecursorsprivate
ms2ReaderGenerateMS1MS2Spectrum(const MsRunIdCstSPtr &msrun_id, std::vector< QualifiedMassSpectrum > &qualified_mass_spectrum_list, SpectrumCollectionHandlerInterface &handler, const SpectrumDescr &spectrum_descr, unsigned int ms_level)pappso::TimsDdaPrecursorsprivate
ms2ReaderSpectrumCollectionByMsLevel(const MsRunIdCstSPtr &msrun_id, SpectrumCollectionHandlerInterface &handler, unsigned int ms_level)pappso::TimsDdaPrecursors
rawReaderSpectrumCollectionByMsLevel(const MsRunIdCstSPtr &msrun_id, SpectrumCollectionHandlerInterface &handler, unsigned int ms_level)pappso::TimsDdaPrecursors
setMonoThread(bool is_mono_thread)pappso::TimsDdaPrecursors
setMs1FilterCstSPtr(pappso::FilterInterfaceCstSPtr &filter)pappso::TimsDdaPrecursors
setMs2BuiltinCentroid(bool centroid)pappso::TimsDdaPrecursors
setMs2FilterCstSPtr(pappso::FilterInterfaceCstSPtr &filter)pappso::TimsDdaPrecursors
TimsDatapappso::TimsDdaPrecursorsprivate
TimsDdaPrecursors(QSqlQuery &query, TimsData *tims_data_origin)pappso::TimsDdaPrecursors
~TimsDdaPrecursors()pappso::TimsDdaPrecursors